Run RNA-PolIII-A-CDE_AF2 (adq_3OD5fnvX)
Status: FINISHED
Your DisVis run has successfully completed.
Please cite the following papers in your work:- R.V. Honorato, P.I. Koukos, B. Jimenez-Garcia, A. Tsaregorodtsev, M. Verlato, A. Giachetti, A. Rosato and A.M.J.J. Bonvin (2021). Structural biology in the clouds: The WeNMR-EOSC Ecosystem. Frontiers Mol. Biosci., 8, fmolb.2021.729513.
- G.C.P. van Zundert, M. Trellet, J. Schaarschmidt, Z. Kurkcuoglu, M. David, M. Verlato, A. Rosato and A.M.J.J. Bonvin (2016)
The DisVis and PowerFit web servers: Explorative and Integrative
Modeling of Biomolecular Complexes.
J. Mol. Biol., Advanced Online Publication. - G.C.P. van Zundert and A.M.J.J. Bonvin (2015) DisVis: Quantifying and visualizing accessible interaction space of distance-restrained biomolecular complexes." Bioinformatics 31, 3222-3224.
Note: Your results will be stored for 14 days before being removed from the server, please make a backup as soon as possible.
Questions / feedback ? ask.bioexcel.eu
Please also consider giving us some feedback by filling our online survey.
Accessible Interaction Space
The accessible interaction space consistent with at least N restraints is depicted below. Use the slider to adjust N and the arrows on the side of the images to change the view.
Current Level (N): 1
Images were generated with UCSF Chimera.
Accessible Complexes
The table below lists the number of complexes consistent with at least N restraints as raw number and as fraction of all complexes.
Number of consistent restraints (N) | Number of accessible complexes consistent with at least N restraints | Fraction of accessible complexes consistent with at least N restraints |
---|---|---|
0 | 166819199 | 100.00 % |
1 | 3993081 | 2.39 % |
2 | 475886 | 0.29 % |
z-Score
IMPORTANT! Complexes consistent with all restraints you provided exist indicating that there are no false positives among your restraints. The tables listing z-Scores and Violations can thus be ignored but are provided as part of the DisVis output nevertheless.
# | Restraint | Average violated fraction | Standard deviation | Z-score |
---|---|---|---|---|
1 | A5394(CB)-C65(CB) | 0.21 | 0.21 | -1.00 |
2 | A5394(CB)-C123(CB) | 0.23 | 0.23 | 1.00 |
Violations
IMPORTANT! Complexes consistent with all restraints you provided exist indicating that there are no false positives among your restraints. The tables listing z-Scores and Violations can thus be ignored but are provided as part of the DisVis output nevertheless.
Number of consistent restraints (N) | Restraint 1 | Restraint 2 |
---|---|---|
1 | 0.42 | 0.46 |